STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0652Conserved hypothetical protein; Similar to functionally unknown protein. (393 aa)    
Predicted Functional Partners:
tagD
Teichoic acid biosynthesis protein TagD.
  
  
 0.784
MCCL_0654
Conserved hypothetical protein; Similar to teichoic acid biosynthesis protein tagX.
 
 
 0.782
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.653
MCCL_0653
Conserved hypothetical protein; Similar to teichoic acid biosynthesis protein TagB.
 
    0.645
MCCL_0655
Conserved hypothetical protein; Similar to galactosamine-containing minor teichoic acid biosynthesis protein.
  
    0.540
MCCL_0648
Conserved hypothetical protein; Similar to minor teichoic acid biosynthesis protein GgaB.
 
 
 0.495
MCCL_0671
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein CapF.
  
  
 0.437
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.