STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capOCapsular polysaccharide synthesis enzyme cap5O; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (418 aa)    
Predicted Functional Partners:
mnaA
UDP-GlcNAc 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 0.991
MCCL_0659
Group 1 family glycosyl transferase.
 
  
 0.867
MCCL_0666
Conserved hypothetical protein; Similar to group 1 glycosyl transferase.
 
  
 0.822
MCCL_0661
Hypothetical protein.
 
  
 0.646
MCCL_0660
Conserved hypothetical protein; Similar to teichoic acid ABC transporter permease.
  
    0.596
MCCL_0664
Hypothetical protein.
  
  
 0.554
MCCL_0665
Conserved hypothetical protein; Similar to teichoic acids export ATP-binding protein tagH.
  
    0.553
MCCL_0671
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein CapF.
  
  
 0.538
MCCL_0662
Hypothetical protein.
       0.531
MCCL_0663
Hypothetical protein.
       0.521
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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