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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0661Hypothetical protein. (377 aa)    
Predicted Functional Partners:
MCCL_0664
Hypothetical protein.
 
   0.950
MCCL_0667
Hypothetical protein.
 
   0.877
MCCL_0666
Conserved hypothetical protein; Similar to group 1 glycosyl transferase.
 
     0.862
MCCL_0659
Group 1 family glycosyl transferase.
 
     0.843
MCCL_0665
Conserved hypothetical protein; Similar to teichoic acids export ATP-binding protein tagH.
  
 
 0.798
MCCL_0662
Hypothetical protein.
       0.793
MCCL_0660
Conserved hypothetical protein; Similar to teichoic acid ABC transporter permease.
  
  
 0.779
MCCL_0663
Hypothetical protein.
       0.757
MCCL_1830
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.706
MCCL_0169
Hypothetical protein.
  
     0.691
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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