STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0668Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein CapA. (225 aa)    
Predicted Functional Partners:
MCCL_0669
Capsular polysaccharide biosynthesis protein CapB homolog.
 
 0.998
MCCL_1635
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.925
MCCL_0678
Capsular polysaccharide synthesis protein CapM homolog.
 
  
 0.898
MCCL_0670
Capsular polysaccharide biosynthesis protein CapD homolog.
 
  
 0.822
MCCL_0671
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein CapF.
 
  
 0.732
MCCL_0315
Mrp/Nbp35 family ATP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.633
MCCL_0676
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein.
 
  
 0.550
MCCL_0667
Hypothetical protein.
  
  
 0.546
MCCL_0673
Conserved hypothetical protein; Similar to galactoside O-acetyltransferase.
  
    0.461
capI
Capsular polysaccharide biosynthesis protein CapI.
  
    0.449
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.