STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0678Capsular polysaccharide synthesis protein CapM homolog. (187 aa)    
Predicted Functional Partners:
tagA
UDP-N-acetyl-D-mannosamine transferase homolog; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.924
MCCL_0676
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein.
  
 0.920
MCCL_0669
Capsular polysaccharide biosynthesis protein CapB homolog.
 
  
 0.910
MCCL_0668
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein CapA.
 
  
 0.898
MCCL_0670
Capsular polysaccharide biosynthesis protein CapD homolog.
 
  
 0.874
MCCL_0671
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein CapF.
  
  
 0.805
MCCL_0673
Conserved hypothetical protein; Similar to galactoside O-acetyltransferase.
  
  
 0.775
capL
Capsular polysaccharide biosynthesis protein CapL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.764
MCCL_0677
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.762
capI
Capsular polysaccharide biosynthesis protein CapI.
  
  
 0.746
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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