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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoBCytochrome D ubiquinol oxidase subunit I. (450 aa)    
Predicted Functional Partners:
cyoA
Cytochrome D ubiquinol oxidase subunit II.
 
 0.999
MCCL_0705
Potassium transport system NAD-binding component.
  
  
 0.839
MCCL_0447
Conserved hypothetical protein; Similar to MsbA family ABC transporter, ATP-binding protein.
 
  
 0.828
MCCL_0448
Conserved hypothetical protein; Similar to MsbA family ABC transporter, ATP-binding protein.
 
  
 0.753
sdhA-2
Succinate dehydrogenase flavoprotein subunit.
  
  
 0.726
sdhB-2
Succinate dehydrogenase iron-sulfur protein subunit.
  
  
 0.686
nrdH
Redoxin faimily protein NrdH.
       0.584
MCCL_0566
Conserved hypothetical protein; Similar to pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.581
MCCL_1451
Conserved hypothetical protein; Similar to proline dehydrogenase.
   
 
 0.549
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
  
  
 0.548
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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