STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (360 aa)    
Predicted Functional Partners:
potB
Spermidine/putrescine ABC transporter permease protein.
 
 0.998
potD
Spermidine/putrescine-binding protein.
 
 
 0.998
potC
Spermidine/putrescine ABC transporter permease protein.
 
 
 0.997
MCCL_0714
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.854
MCCL_0719
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.848
MCCL_0342
Conserved hypothetical protein; Similar to ABC transporter, permease protein.
 
  
 0.639
MCCL_0130
Conserved hypothetical protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.615
MCCL_1584
Glutamine-binding periplasmic protein homolog.
 
 
 0.462
MCCL_0474
ABC-type transporter periplasmic glycine betaine choline-binding protein homolog.
  
 
  0.433
MCCL_1238
Conserved hypothetical protein; Similar to DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.426
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.