STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpAPenicillin-binding protein 1. (749 aa)    
Predicted Functional Partners:
MCCL_1605
Conserved hypothetical protein; Similar to transglycosylase domain protein.
 
 
 0.971
pbpB
Penicillin-binding protein 2.
 
 
0.970
divIB
Conserved hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.947
pbpC
Penicillin-binding protein 3.
  
  
0.938
pbpD
Penicillin-binding protein 4; Belongs to the peptidase S11 family.
  
 
 0.926
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
 
 
 0.924
mruD
UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.921
MCCL_0728
FtsW/RodA/SpoVE family cell division protein homolog; Belongs to the SEDS family.
 
 0.916
mraY
UDP-MurNAc-pentapeptide phosphotransferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.916
MCCL_1644
Conserved hypothetical protein; Similar to D-alanyl-D-alanine carboxypeptidase.
  
  
 0.914
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.