STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0812Conserved hypothetical protein; Similar to sortase. (216 aa)    
Predicted Functional Partners:
sdhA
L-serine deaminase alpha subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.774
recG
ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.774
sdhB
L-serine dehydratase beta subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.751
MCCL_0429
Conserved hypothetical protein; Similar to major facilitator superfamily protein.
  
     0.661
ezrA
Conserved hypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.627
MCCL_0055
Conserved hypothetical protein; Similar to S. epidermidis secretory antigen SsaA.
  
     0.604
MCCL_1565
Conserved hypothetical protein; Similar to DNA-binding protein.
  
     0.590
MCCL_0401
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.589
MCCL_0514
Conserved hypothetical protein; Similar to functionally unknown protein.
  
   
 0.587
MCCL_1286
Conserved hypothetical protein; Similar to rod shape-determining protein MreD.
  
     0.584
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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