STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0827Conserved hypothetical protein; Similar to functionally unknown protein. (125 aa)    
Predicted Functional Partners:
MCCL_0826
Conserved hypothetical protein; Similar to functionally unknown protein.
 
  
 0.958
MCCL_0825
Conserved hypothetical protein; Similar to functionally unknown protein.
 
  
 0.957
MCCL_0828
Glycosyl transferase family 2 protein homolog.
 
  
 0.931
MCCL_1551
Conserved hypothetical protein; Similar to signal transduction protein.
  
     0.686
MCCL_0408
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.577
MCCL_0829
Conserved hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.573
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.573
MCCL_1668
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.573
MCCL_1652
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.562
MCCL_1557
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.550
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.