STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0868Conserved hypothetical protein; Similar to transcriptional regulator. (237 aa)    
Predicted Functional Partners:
MCCL_0870
Conserved hypothetical protein; Similar to zinc protease.
 
     0.877
MCCL_0869
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.872
ftsK
DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
       0.845
MCCL_0871
Conserved hypothetical protein; Similar to short chain dehydrogenase.
       0.834
MCCL_0872
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.779
MCCL_0873
Conserved hypothetical protein; Similar to transcriptional regulator.
       0.743
MCCL_0874
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.705
MCCL_1449
Conserved hypothetical protein; Similar to transcriptional regulator.
   
    0.701
glcB
Glucose-specific PTS system IIABC component.
 
  
 0.634
rnj-2
Conserved hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.
       0.622
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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