STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0887Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0342 family. (141 aa)    
Predicted Functional Partners:
MCCL_0741
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0342 family.
  
 
 
 0.921
maiB
tRNA-i(6)A37 modification enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
    0.864
MCCL_1826
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.767
MCCL_0739
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.760
MCCL_1124
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.755
MCCL_1420
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.750
MCCL_0316
Conserved hypothetical protein; Similar to signaling pathway activation protein KinB.
  
     0.747
MCCL_0726
Mn2+/Zn2+ ABC transporter permease protein.
  
     0.741
MCCL_1001
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.738
MCCL_1590
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.737
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.