STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0898Conserved hypothetical protein; Similar to functionally unknown protein. (419 aa)    
Predicted Functional Partners:
hflX
Conserved hypothetical protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
    0.885
ddl
D-alanine-D-alanine ligase; Cell wall formation.
      0.727
MCCL_1931
Conserved hypothetical protein; Similar to Orn/Lys/Arg decarboxylase family protein.
 
   
 0.722
sepF
YlmF protein homolog; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
     0.680
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.624
MCCL_1661
Conserved hypothetical protein; Similar to lysine decarboxylase.
 
   
 0.611
MCCL_0871
Conserved hypothetical protein; Similar to short chain dehydrogenase.
  
     0.570
glnR
Glutamine synthetase repressor homolog.
       0.567
MCCL_1257
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0297 family.
 
     0.544
glnA
Glutamine-ammonia ligase.
       0.541
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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