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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0922Conserved hypothetical protein; ORF003 of bacteriophage 187 homolog. (478 aa)    
Predicted Functional Partners:
MCCL_0921
Conserved hypothetical protein; ORF009 of bacteriophage 96 homolog.
 
    0.936
MCCL_0923
Hypothetical protein.
 
     0.916
MCCL_0927
Conserved hypothetical protein; Similar to phage-related protein.
 
    0.842
MCCL_0925
Conserved hypothetical protein; Similar to ORF021 of bacteriophage 187.
 
    0.830
MCCL_0930
Conserved hypothetical protein; Similar to phage-related protein.
 
   
 0.820
MCCL_0920
Conserved hypothetical protein; Similar to ORF027 of bacteriophage 96.
  
    0.806
MCCL_0960
Terminase, large subunit.
 
  
 0.738
MCCL_0907
Anti-repressor homolog.
  
     0.625
MCCL_1541
Anti-repressor.
  
     0.619
MCCL_0910
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.614
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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