STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0925Conserved hypothetical protein; Similar to ORF021 of bacteriophage 187. (221 aa)    
Predicted Functional Partners:
MCCL_0927
Conserved hypothetical protein; Similar to phage-related protein.
 
    0.871
MCCL_0922
Conserved hypothetical protein; ORF003 of bacteriophage 187 homolog.
 
    0.830
MCCL_0923
Hypothetical protein.
 
     0.826
MCCL_0930
Conserved hypothetical protein; Similar to phage-related protein.
 
     0.759
MCCL_0926
Conserved hypothetical protein; ORF011 of Bacteriophage 187 homolog.
       0.755
MCCL_0921
Conserved hypothetical protein; ORF009 of bacteriophage 96 homolog.
 
    0.565
MCCL_0966
Hypothetical protein.
   
   0.555
MCCL_1524
Conserved hypothetical protein; Similar to phage capsid protein.
   
   0.555
MCCL_0924
Hypothetical protein.
       0.548
MCCL_1517
Conserved hypothetical protein; Similar to phage tail fiber protein.
       0.454
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.