STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0992Conserved hypothetical protein; Similar to Mn2+Zn2+ ABC transporter periplasmic substrate binding protein; Belongs to the bacterial solute-binding protein 9 family. (315 aa)    
Predicted Functional Partners:
mreB
ABC transport system permease component MreB.
 
 
 0.984
mreA
ABC transport system ATPase component MreA.
 
 
 0.983
MCCL_0094
ABC transporter permease protein homolog.
 
  
 0.913
MCCL_0095
Conserved hypothetical protein; Similar to ABC transporter ATP-binding protein.
 
  
 0.900
MCCL_0991
Low-affinity zinc transport protein homolog.
  
  
 0.742
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.538
MCCL_0451
Conserved hypothetical protein; Similar to cobalamin synthesis P47K family protein.
  
  
 0.498
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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