STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1062Conserved hypothetical protein; Similar to glyoxalase/bleomycin resistance protein. (283 aa)    
Predicted Functional Partners:
MCCL_0073
Phospholipase/carboxylesterase family protein.
    0.793
MCCL_1717
Conserved hypothetical protein; Similar to glyoxalase family protein.
 
  
 0.638
odhB
Dihydrolipoamide acetyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
  
   0.622
MCCL_1060
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.616
MCCL_1061
CbbQ/NirQ/NorQ/GpvN family protein.
       0.616
odhA
2-oxoglutarate dehydrogenase, E1 component homolog; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).
     
 0.580
sdhC
Succinate dehydrogenase cytochrome b558 subunit.
   
    0.449
MCCL_1065
Sensor histidine kinase ArlS homolog.
  
    0.411
MCCL_1066
Response regulator ArlR homolog.
       0.403
MCCL_1067
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family.
  
    0.401
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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