STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1066Response regulator ArlR homolog. (223 aa)    
Predicted Functional Partners:
MCCL_1065
Sensor histidine kinase ArlS homolog.
 0.998
MCCL_0089
Conserved hypothetical protein; Similar to two-component sensor kinase protein.
 
 
 0.934
MCCL_1698
Conserved hypothetical protein; Similar to sensory transduction protein kinase.
 
 
 0.856
MCCL_1137
Conserved hypothetical protein; Similar to sensor kinase protein.
 
 0.835
MCCL_1358
Conserved hypothetical protein; Similar to alkaline phosphatase synthesis sensor protein.
 
 0.828
MCCL_0281
Sensor histidine kinase.
 
 0.816
MCCL_1067
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family.
       0.762
MCCL_0022
Two-component sensor histidine kinase.
 
 0.734
odhA
2-oxoglutarate dehydrogenase, E1 component homolog; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).
  
  
 0.597
odhB
Dihydrolipoamide acetyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
       0.567
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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