STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1081Conserved hypothetical protein; Similar to functionally unknown protein. (122 aa)    
Predicted Functional Partners:
MCCL_1082
Conserved hypothetical protein; Similar to functionally unknown protein.
     0.991
MCCL_1080
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0403 family.
 
     0.831
efp
Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.822
MCCL_1079
Hypothetical protein.
       0.783
MCCL_0558
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.734
MCCL_1826
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.691
MCCL_1410
Acetoin utilization protein AcuA homolog.
  
     0.671
MCCL_1124
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.647
MCCL_0872
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.612
MCCL_0727
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.609
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.