STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1088Conserved hypothetical protein; Similar to thiosulfate sulfurtransferase. (279 aa)    
Predicted Functional Partners:
MCCL_1790
Cystathionine gamma-synthase homolog.
  
 
 0.936
MCCL_1262
Conserved hypothetical protein; Similar to functionally unknown protein.
  
 0.921
MCCL_1387
Conserved hypothetical protein; Similar to aminotransferase, class V.
  
 0.921
lctD
L-lactate dehydrogenase 1; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
 
  0.904
MCCL_0255
Lactate dehydrogenase homolog; Belongs to the LDH/MDH superfamily.
   
 
  0.904
MCCL_1427
Conserved hypothetical protein; Similar to aminotransferase.
     
  0.900
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.840
MCCL_1089
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.821
MCCL_1087
Conserved hypothetical protein; Similar to 5'-3' exonuclease.
       0.797
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
  
 0.748
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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