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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpBPenicillin-binding protein 2. (778 aa)    
Predicted Functional Partners:
pbpC
Penicillin-binding protein 3.
 
 
 0.977
pbpA
Penicillin-binding protein 1.
 
 
0.970
pbpD
Penicillin-binding protein 4; Belongs to the peptidase S11 family.
  
 
 0.940
MCCL_1407
Conserved hypothetical protein; Similar to penicillin-binding protein 1A.
  
  
 
0.926
MCCL_1094
Conserved hypothetical protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
 
 
 0.925
MCCL_1605
Conserved hypothetical protein; Similar to transglycosylase domain protein.
  
  
 
0.919
MCCL_1644
Conserved hypothetical protein; Similar to D-alanyl-D-alanine carboxypeptidase.
     
 0.901
MCCL_1645
Conserved hypothetical protein; Similar to D-alanyl-D-alanine carboxypeptidase.
     
 0.901
recU
Recombination protein RecU homolog; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
 
    0.861
MCCL_1742
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 
 
 0.777
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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