STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1106Lipopolysaccharide biosynthesis-related pr-like protein homolog. (377 aa)    
Predicted Functional Partners:
MCCL_1105
Conserved hypothetical protein; Similar to putative poly(A) polymerase.
  
  
 0.885
birA
Conserved hypothetical protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.867
bshC
Conserved hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
   
 0.864
dinG
Conserved hypothetical protein; 3'-5' exonuclease.
  
    0.861
MCCL_1107
Conserved hypothetical protein; Similar to pyrophosphatase.
 
  
 0.861
MCCL_1160
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0403 family.
  
     0.770
MCCL_1080
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0403 family.
  
     0.769
MCCL_1130
Pyridine nucleotide-disulfide oxidoreductase.
  
     0.737
asnS
asparaginyl-tRNA synthetase.
     
 0.662
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.594
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.