STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1151Conserved hypothetical protein; Similar to short-chain dehydrogenase. (248 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase homolog; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.721
MCCL_0804
Conserved hypothetical protein; Similar to cytochrome P450 family protein.
  
 
 0.461
MCCL_1273
Conserved hypothetical protein; Similar to single-strand DNA-specific exonuclease.
       0.454
MCCL_0871
Conserved hypothetical protein; Similar to short chain dehydrogenase.
 
 
 0.440
polA
DNA polymerase I homolog; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
  
 0.410
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.