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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1264Conserved hypothetical protein; Similar to transcriptional regulator. (140 aa)    
Predicted Functional Partners:
MCCL_1262
Conserved hypothetical protein; Similar to functionally unknown protein.
 
  
 0.650
MCCL_1265
Conserved hypothetical protein; Similar to ATPase, AAA family.
       0.616
MCCL_1387
Conserved hypothetical protein; Similar to aminotransferase, class V.
  
  
 0.600
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
  
  
 0.596
nifU
Nitrogen fixation protein NifU.
  
  
 0.521
MCCL_0684
Conserved hypothetical protein; Similar to flavohemoprotein; Belongs to the globin family.
     
 0.473
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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