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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1288Conserved hypothetical protein; Similar to beta-hexosaminidase. (379 aa)    
Predicted Functional Partners:
MCCL_0979
Hypothetical protein.
    
 0.919
MCCL_1287
Conserved hypothetical protein; Involved in formation and maintenance of cell shape.
     
 0.689
MCCL_1286
Conserved hypothetical protein; Similar to rod shape-determining protein MreD.
       0.687
MCCL_1290
Conserved hypothetical protein; Similar to ribosomal-protein-alanine acetyltransferase.
 
     0.579
MCCL_1291
ABC transporter, ATP-binding protein and permease homolog.
 
     0.543
MCCL_1292
ABC transporter, ATP-binding protein and permease homolog.
 
     0.538
MCCL_0556
Conserved hypothetical protein; Similar to functionally unknown protein.
 
  
 0.479
MCCL_1289
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.477
MCCL_0278
Sugar-specific permease EIIA 1 domain.
  
  
 0.475
glcB
Glucose-specific PTS system IIABC component.
  
  
 0.475
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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