STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1296Conserved hypothetical protein; Similar to C4-dicarboxylate anaerobic carrier protein. (460 aa)    
Predicted Functional Partners:
MCCL_1294
DNA repair protein RadC homolog; Belongs to the UPF0758 family.
     
 0.646
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
     
 0.549
MCCL_1807
Na+/H+ antiporter NnaC homolog.
 
     0.508
MCCL_1297
Folylpolyglutamate synthase homolog; Belongs to the folylpolyglutamate synthase family.
       0.477
MCCL_1295
Conserved hypothetical protein; Similar to aspartic endopeptidase.
       0.471
MCCL_0381
Conserved hypothetical protein; Similar to p-aminobenzoyl-glutamate transporter.
  
     0.470
MCCL_1293
Hypothetical protein.
       0.463
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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