Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCCL_0015 | MCCL_0102 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.705 |
MCCL_0015 | MCCL_0188 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.742 |
MCCL_0015 | MCCL_0962 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.733 |
MCCL_0015 | MCCL_0974 | Conserved hypothetical protein; Similar to functionally unknown protein. | Hypothetical protein. | 0.752 |
MCCL_0015 | MCCL_0975 | Conserved hypothetical protein; Similar to functionally unknown protein. | Hypothetical protein. | 0.757 |
MCCL_0015 | MCCL_1134 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.749 |
MCCL_0015 | MCCL_1310 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.766 |
MCCL_0015 | MCCL_1311 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.417 |
MCCL_0015 | MCCL_1551 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to signal transduction protein. | 0.727 |
MCCL_0015 | MCCL_1652 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.738 |
MCCL_0102 | MCCL_0015 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.705 |
MCCL_0102 | MCCL_0188 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.771 |
MCCL_0102 | MCCL_0962 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.772 |
MCCL_0102 | MCCL_0974 | Conserved hypothetical protein; Similar to functionally unknown protein. | Hypothetical protein. | 0.770 |
MCCL_0102 | MCCL_0975 | Conserved hypothetical protein; Similar to functionally unknown protein. | Hypothetical protein. | 0.770 |
MCCL_0102 | MCCL_1134 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.754 |
MCCL_0102 | MCCL_1310 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.765 |
MCCL_0102 | MCCL_1551 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to signal transduction protein. | 0.748 |
MCCL_0102 | MCCL_1652 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.747 |
MCCL_0188 | MCCL_0015 | Conserved hypothetical protein; Similar to functionally unknown protein. | Conserved hypothetical protein; Similar to functionally unknown protein. | 0.742 |
page 1 of 5