STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasENitrite reductase small subunit. (103 aa)    
Predicted Functional Partners:
nasD
Nitrite reductase large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 0.999
narH
Respiratory nitrate reductase beta chain.
  
 
 0.971
MCCL_1338
Conserved hypothetical protein; Similar to uroporphyrin-III C-methyltransferase.
 
  
 0.970
narI
Nitrate reductase gamma chain.
  
 
 0.959
narG
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.954
glnA
Glutamine-ammonia ligase.
   
 
 0.919
gudB
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
MCCL_1483
Conserved hypothetical protein; Similar to acetamidase/formamidase.
     
  0.900
MCCL_1341
Conserved hypothetical protein; Similar to siroheme synthase.
  
  
 0.898
MCCL_1342
Conserved hypothetical protein; Similar to transcriptional regulator NirR.
 
  
 0.871
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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