STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1420Conserved hypothetical protein; Similar to functionally unknown protein. (286 aa)    
Predicted Functional Partners:
MCCL_1416
Conserved hypothetical protein; Similar to general stress protein.
 
     0.906
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
     0.893
MCCL_1419
phenylalanyl-tRNA synthetase beta subunit homolog; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
    0.872
MCCL_1418
Conserved hypothetical protein; Similar to DNA segregation ATPase FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
    0.859
MCCL_1501
Conserved hypothetical protein; Similar to MutT/nudix family protein.
  
     0.770
MCCL_0616
GTP pyrophosphokinase homolog.
  
     0.759
MCCL_1600
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.758
MCCL_0887
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0342 family.
  
     0.750
MCCL_1603
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.730
MCCL_0563
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.721
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.