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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1422Conserved hypothetical protein; Similar to functionally unknown protein. (334 aa)    
Predicted Functional Partners:
MCCL_1421
Conserved hypothetical protein; Similar to thioredoxin family protein.
       0.797
MCCL_1420
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.541
MCCL_1419
phenylalanyl-tRNA synthetase beta subunit homolog; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.537
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.523
MCCL_1418
Conserved hypothetical protein; Similar to DNA segregation ATPase FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
       0.518
MCCL_1424
ABC-type amino acid transport system permease component.
       0.482
MCCL_1423
ABC-type amino acid transport system ATP-binding protein component.
       0.479
MCCL_1425
ABC-type amino acid transport system substrate binding component; Belongs to the bacterial solute-binding protein 3 family.
       0.479
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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