STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1424ABC-type amino acid transport system permease component. (242 aa)    
Predicted Functional Partners:
MCCL_1423
ABC-type amino acid transport system ATP-binding protein component.
 0.999
MCCL_1425
ABC-type amino acid transport system substrate binding component; Belongs to the bacterial solute-binding protein 3 family.
 0.999
MCCL_1583
Amino acid ABC transporter, ATP-binding protein.
 
 0.974
MCCL_1584
Glutamine-binding periplasmic protein homolog.
 
0.710
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.611
MCCL_1426
Conserved hypothetical protein; Similar to aminopeptidase.
       0.580
MCCL_1421
Conserved hypothetical protein; Similar to thioredoxin family protein.
  
   0.534
MCCL_0343
Conserved hypothetical protein; Similar to ABC transporter, ATP-binding protein.
 
 
 
  0.517
MCCL_1422
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.482
mreB
ABC transport system permease component MreB.
   
 
 0.468
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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