STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opuCAGlycine betaine/carnitine/choline ABC transporter, ATP-binding protein. (376 aa)    
Predicted Functional Partners:
MCCL_0474
ABC-type transporter periplasmic glycine betaine choline-binding protein homolog.
 0.998
opuCB
Glycine betaine/carnitine/choline ABC transporter, permease protein.
 0.998
opuCD
Glycine betaine/carnitine/choline ABC transporter, permease protein.
 0.998
opuCC
Glycine betaine/carnitine/choline ABC-type transporter, substrate-binding protein.
 
 0.997
MCCL_0473
ABC transporter ATP-binding protein homolog.
  
  
 
0.910
MCCL_1465
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.590
MCCL_0105
Conserved hypothetical protein; Similar to ABC transporter ATP-binding protein.
 
    
0.575
MCCL_1460
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.559
hutG
Conserved hypothetical protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
       0.539
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.