STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhCAlcohol dehydrogenase; Glutathione-dependent formaldehyde dehydrogenase. (383 aa)    
Predicted Functional Partners:
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.915
MCCL_1656
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.915
MCCL_0425
Dehydrogenase.
 
    0.675
MCCL_0090
Short-chain dehydrogenase/reductase family protein.
 
    0.630
MCCL_0804
Conserved hypothetical protein; Similar to cytochrome P450 family protein.
  
   
 0.508
MCCL_1857
2-amino-3-ketobutyrate coenzyme A ligase.
  
  
 0.451
MCCL_1470
Conserved hypothetical protein; Similar to transcriptional regulator, MerR family.
       0.433
sodA
Superoxide dismutase SodA; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
    0.418
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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