STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1482Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the D-glutamate cyclase family. (281 aa)    
Predicted Functional Partners:
MCCL_1487
Conserved hypothetical protein; Similar to transporter.
 
    0.829
MCCL_1492
Conserved hypothetical protein; Similar to allophanate hydrolase subunit 1.
  
    0.726
pxpA
Conserved hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.583
MCCL_1481
Hypothetical protein.
       0.565
MCCL_1491
Conserved hypothetical protein; Similar to allophanate hydrolase subunit 2.
  
    0.527
MCCL_0468
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.506
MCCL_0385
Conserved hypothetical protein; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
  
    0.429
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.