STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsCArsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. (131 aa)    
Predicted Functional Partners:
arsR
Arsenical resistance operon repressor.
 
  
 0.964
MCCL_0384
Conserved hypothetical protein; Similar to metallo-beta-lactamase superfamily protein.
  
 
 0.901
arsB
Arsenic efflux pump protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
  
  
 0.846
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.720
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
   
 
 0.683
MCCL_0489
Conserved hypothetical protein; Similar to functionally unknown protein.
  
 
 0.520
MCCL_0063
Thioredoxin homolog.
  
 
 0.515
MCCL_0534
Thioredoxin homolog.
  
 
 0.515
MCCL_1483
Conserved hypothetical protein; Similar to acetamidase/formamidase.
  
    0.515
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.474
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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