STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1529Conserved hypothetical protein; Similar to phage endonuclease. (134 aa)    
Predicted Functional Partners:
MCCL_1527
Conserved hypothetical protein; Similar to phage terminase large subunit.
 
  
 0.942
MCCL_1528
Conserved hypothetical protein; Similar to phage terminase small subunit.
 
    0.932
MCCL_1526
Conserved hypothetical protein; Similar to phage portal protein.
 
  
 0.878
MCCL_1524
Conserved hypothetical protein; Similar to phage capsid protein.
 
    0.846
MCCL_1525
Conserved hypothetical protein; Similar to phage prohead protease.
 
     0.808
MCCL_1517
Conserved hypothetical protein; Similar to phage tail fiber protein.
 
    0.758
MCCL_1521
Conserved hypothetical protein; Similar to phage-related protein.
 
     0.720
MCCL_1541
Anti-repressor.
 
    0.530
MCCL_0907
Anti-repressor homolog.
 
    0.516
MCCL_1530
Conserved hypothetical protein; Similar to phage-related protein.
       0.503
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.