STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1553ABC transporter, ATP-binding protein. (246 aa)    
Predicted Functional Partners:
MCCL_0105
Conserved hypothetical protein; Similar to ABC transporter ATP-binding protein.
    
0.925
MCCL_1552
Conserved hypothetical protein; Similar to transporter protein.
 
  
 0.824
MCCL_0166
ABC-type cobalamin Fe3+-siderophores transport system ATPase component.
   
0.815
MCCL_0343
Conserved hypothetical protein; Similar to ABC transporter, ATP-binding protein.
 
    
0.719
MCCL_1554
HIT-family protein homolog.
       0.708
MCCL_1699
Conserved hypothetical protein; Similar to ABC transporter, permease protein.
  
 
 0.658
MCCL_0291
ABC-type transport system ATPase component.
    
0.582
atpD
ATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.499
atpG
ATP synthase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.490
atpA
ATP synthase alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.489
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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