STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1554HIT-family protein homolog. (138 aa)    
Predicted Functional Partners:
MCCL_1552
Conserved hypothetical protein; Similar to transporter protein.
     
 0.763
MCCL_1553
ABC transporter, ATP-binding protein.
       0.708
MCCL_1555
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.672
MCCL_1556
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.635
MCCL_1557
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.453
MCCL_1238
Conserved hypothetical protein; Similar to DNA internalization-related competence protein ComEC/Rec2.
       0.442
MCCL_1558
Peptidyl-prolyl cis/trans-isomerase PrsA homolog.
  
   0.438
MCCL_0977
Conserved hypothetical protein; Similar to ORF002 of bacteriophage 2638A.
    
   0.424
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
 
 
 0.423
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.413
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.