STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1556Conserved hypothetical protein; Similar to functionally unknown protein. (216 aa)    
Predicted Functional Partners:
MCCL_1557
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.788
MCCL_1603
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.735
MCCL_1203
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
     0.729
MCCL_1554
HIT-family protein homolog.
       0.635
MCCL_0619
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.615
MCCL_0740
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.605
MCCL_1781
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.603
MCCL_1555
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.601
MCCL_1753
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.595
MCCL_0726
Mn2+/Zn2+ ABC transporter permease protein.
  
     0.580
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.