Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCCL_1570Two-component response regulator. (210 aa)    
Predicted Functional Partners:
MCCL_1571
Signal transduction histidine kinase.
 
 
 0.985
MCCL_0293
Conserved hypothetical protein; Similar to sensor histidine kinase.
 
 0.902
nreB
Two-component sensor histidine kinase of nitrate reduction operon.
 
 
 0.862
vraS
Two-component sensor histidine kinase VraS homolog.
 
 
 0.862
MCCL_1572
GCN5-related N-acetyltransferase homolog; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase homolog.
     
 0.804
MCCL_1573
Ribosomal large subunit pseudouridine synthase homolog.
 
     0.685
MCCL_1574
Conserved hypothetical protein; Similar to nitroreductase.
       0.486
MCCL_1163
Conserved hypothetical protein; Similar to response regulator receiver.
  
     0.450
MCCL_0281
Sensor histidine kinase.
 
 
 0.443
MCCL_0021
DNA-binding response regulator.
  
 
 0.438
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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