STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1583Amino acid ABC transporter, ATP-binding protein. (240 aa)    
Predicted Functional Partners:
MCCL_1584
Glutamine-binding periplasmic protein homolog.
 0.999
MCCL_1424
ABC-type amino acid transport system permease component.
 
 0.974
MCCL_1425
ABC-type amino acid transport system substrate binding component; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.877
MCCL_1581
SpoU rRNA methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.639
MCCL_1582
Conserved hypothetical protein; Similar to iron-sulfur cluster-binding protein.
       0.639
MCCL_1580
Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
       0.577
MCCL_1585
Conserved hypothetical protein; Similar to aromatic amino acid aminotransferase.
  
    0.551
MCCL_1639
High affinity proline permease; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.477
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.433
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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