STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1584Glutamine-binding periplasmic protein homolog. (483 aa)    
Predicted Functional Partners:
MCCL_1583
Amino acid ABC transporter, ATP-binding protein.
 0.999
MCCL_1423
ABC-type amino acid transport system ATP-binding protein component.
 
 0.992
MCCL_1424
ABC-type amino acid transport system permease component.
 
0.710
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.706
MCCL_1581
SpoU rRNA methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
 
   
 0.703
argH
Argininosuccinate lyase.
 
  
 0.654
MCCL_1582
Conserved hypothetical protein; Similar to iron-sulfur cluster-binding protein.
       0.642
MCCL_1789
Hypothetical protein.
  
 
 0.623
MCCL_1580
Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
   
   0.621
MCCL_1585
Conserved hypothetical protein; Similar to aromatic amino acid aminotransferase.
  
  
 0.620
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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