STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recXConserved hypothetical protein; Modulates RecA activity; Belongs to the RecX family. (270 aa)    
Predicted Functional Partners:
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.918
MCCL_1603
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.862
MCCL_1602
Conserved hypothetical protein; Similar to teichoic acid translocation ATP-binding protein TagH.
  
    0.853
MCCL_1601
Conserved hypothetical protein; Similar to teichoic acid translocation permease protein.
  
    0.852
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
  
 0.780
recO
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
 
  
 0.666
MCCL_1605
Conserved hypothetical protein; Similar to transglycosylase domain protein.
       0.635
MCCL_0996
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.592
MCCL_1324
Conserved hypothetical protein; Similar to colicin V production protein.
  
   
 0.560
dnaB-2
Chromosome replication initiation/membrane attachment protein.
  
     0.559
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.