STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1655Conserved hypothetical protein; Similar to oxidoreductase. (318 aa)    
Predicted Functional Partners:
MCCL_0360
Conserved hypothetical protein; Similar to functionally unknown protein.
 
  
 0.748
MCCL_1656
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.742
MCCL_0374
Conserved hypothetical protein; Similar to fructokinase.
 
  
 0.687
MCCL_0332
Conserved hypothetical protein; Similar to sugar kinase family protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.676
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.528
MCCL_0351
Conserved hypothetical protein; Converts alpha-aldose to the beta-anomer.
 
  
 0.480
mnaA
UDP-GlcNAc 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.453
gabD
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.434
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.434
MCCL_0582
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.434
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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