STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1736Conserved hypothetical protein; Similar to functionally unknown protein. (173 aa)    
Predicted Functional Partners:
MCCL_1737
Conserved hypothetical protein; Similar to functionally unknown protein.
 
  
 0.983
acpS
Holo-(acyl-carrier-protein) synthase homolog; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
  
    0.867
MCCL_1738
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.835
alr
Alanine racemase homolog; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.797
MCCL_1739
Conserved hypothetical protein; Similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
       0.695
MCCL_0538
Conserved hypothetical protein; Similar to thioredoxin.
  
     0.496
MCCL_1110
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.492
rsbU
Sigma B regulation protein RsbU.
 
     0.490
MCCL_1733
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system.
       0.465
MCCL_0015
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.463
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.