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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1769Conserved hypothetical protein; Similar to low molecular weight protein-tyrosine-phosphatase. (140 aa)    
Predicted Functional Partners:
MCCL_1635
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthesis protein EpsC.
     
 0.910
MCCL_0384
Conserved hypothetical protein; Similar to metallo-beta-lactamase superfamily protein.
  
 
 0.899
MCCL_1768
Ribose 5-phosphate isomerase homolog.
 
    0.884
MCCL_1770
Conserved hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.859
MCCL_1887
ATP:guanido phosphotransferase homolog.
  
  
 0.766
MCCL_1888
Conserved hypothetical protein; Similar to functionally unknown protein.
  
   
 0.764
prmC
Conserved hypothetical protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.704
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
    0.684
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
   
 
 0.683
MCCL_1767
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0340 family.
       0.630
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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