STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1822Conserved hypothetical protein; Similar to iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (320 aa)    
Predicted Functional Partners:
MCCL_1823
Conserved hypothetical protein; Similar to iron compound ABC transporter periplasmic component.
 
 
 0.985
MCCL_0166
ABC-type cobalamin Fe3+-siderophores transport system ATPase component.
 
 
 0.953
MCCL_0133
Iron compound ABC transporter binding protein homolog.
 
 
 0.890
MCCL_1837
Conserved hypothetical protein; Similar to ferrichrome ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.823
MCCL_0549
Conserved hypothetical protein; Similar to amino acid ABC transporter ATP-binding protein.
  
 
 0.783
MCCL_1836
Iron compound ABC transporter ATP-binding protein homolog.
  
    0.749
argS
arginyl-tRNA synthetase.
       0.635
MCCL_1825
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.632
MCCL_0168
Cobalamin Fe3+-siderophores ABC transporter permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
0.527
MCCL_1838
Iron compound ABC transporter permease protein homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   
0.501
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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