STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1826Conserved hypothetical protein; Similar to functionally unknown protein. (169 aa)    
Predicted Functional Partners:
MCCL_1827
Conserved hypothetical protein; Similar to phosphohydrolase.
       0.854
MCCL_0887
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0342 family.
  
    0.767
MCCL_0558
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.752
pcrB
PcrB family protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.
  
     0.718
MCCL_1081
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.691
MCCL_0538
Conserved hypothetical protein; Similar to thioredoxin.
  
    0.685
MCCL_1420
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.681
MCCL_1845
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.678
MCCL_0872
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.672
MCCL_1608
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.663
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.