STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1840Conserved hypothetical protein; Similar to amino acid transporter. (485 aa)    
Predicted Functional Partners:
MCCL_1841
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.673
ung
Uracil DNA glycosylase homolog; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.657
thiD-2
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
  
    0.598
MCCL_0170
Alpha-glucosidase homolog.
   
 0.527
MCCL_0314
Amylase homolog.
   
 0.527
MCCL_0362
Alpha-glucosidase homolog.
   
 0.527
MCCL_0596
Conserved hypothetical protein; Similar to alpha-amylase.
   
 0.527
MCCL_1937
Alpha-glucosidase homolog.
   
 0.527
MCCL_1696
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.480
MCCL_0399
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.477
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.