STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1888Conserved hypothetical protein; Similar to functionally unknown protein. (128 aa)    
Predicted Functional Partners:
MCCL_1887
ATP:guanido phosphotransferase homolog.
 
  
 0.996
ctsR
Transcriptional regulator CtsR; Belongs to the CtsR family.
 
  
 0.987
MCCL_1886
Truncated stress response-related Clp ATPase ClpC.
 
  
 0.917
MCCL_1885
Truncated stress response-related Clp ATPase ClpC; Belongs to the ClpA/ClpB family.
 
  
 0.785
MCCL_1769
Conserved hypothetical protein; Similar to low molecular weight protein-tyrosine-phosphatase.
  
   
 0.764
nupC
Pyrimidine nucleoside transport protein.
       0.649
MCCL_1883
Conserved hypothetical protein; Similar to functionally unknown protein.
 
    0.639
fapR
DeoR family transcriptional regulator homolog; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.
  
     0.544
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
    0.502
MCCL_0239
Conserved hypothetical protein; Similar to functionally unknown protein.
  
  
 0.471
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.